So my wife says you need to shrink the hive down and try to get a high density of bees in the hive they will take care of the Beetles as long as there are no holes or crevices in the hive or frames. As far as the other boxes go treat them organically or chemically or you can just stick em in the freezer would probably be the best bet.
Well, like mama always said, if it seems to good to be true, it probably is...
She kept commenting on the rotten fruit smell the entire time we were moving the hives. She went out today and removed the tape off the hives and found hive beetles
We haven't inspected the hive and removed the frames to see how bad the infestation is, but she is thinking the worse. One of the hives is super busy, so I think it will survive as it seems pretty strong, not sure about the smaller hive yet. She is reading her bee books now to try to figure out what to do next.